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Browsing by Author "Pinzon Ardila, Yoan José"

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  • Pattern-matching with bounded gaps in genomic sequences

    Institución: Universidad Autónoma de Bucaramanga

    Revista: Revista Colombiana de Computación

    Autores: Pinzon Ardila, Yoan José; Wang, Shu

    Fecha de publicación en la Revista: 2009-06-01

    Fecha de cosecha en Ciencia Nacional: 2024-07-08

    Recently, some pattern matching algorithms allowing gaps were introduced in Crochemore et al. [Approximate string matching with gaps. Nordic Journal of Computing, 9 (2002):54–65, 2002], where upper-bounded, strict-bounded and unbounded gaps were considered. In this paper we further extend these restrictions on the gaps to permit lower-bounded and (lower-upper)-bounded gaps that we simply refer to as (a,b)-bounded gaps. We give formal definitions for these problems as well as their respective algorithmic solutions.
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